Package: tidyCDISC 0.2.1

Aaron Clark

tidyCDISC: Quick Table Generation & Exploratory Analyses on ADaM-Ish Datasets

Provides users a quick exploratory dive into common visualizations without writing a single line of code given the users data follows the Analysis Data Model (ADaM) standards put forth by the Clinical Data Interchange Standards Consortium (CDISC) <https://www.cdisc.org>. Prominent modules/ features of the application are the Table Generator, Population Explorer, and the Individual Explorer. The Table Generator allows users to drag and drop variables and desired statistics (frequencies, means, ANOVA, t-test, and other summary statistics) into bins that automagically create stunning tables with validated information. The Population Explorer offers various plots to visualize general trends in the population from various vantage points. Plot modules currently include scatter plot, spaghetti plot, box plot, histogram, means plot, and bar plot. Each plot type allows the user to plot uploaded variables against one another, and dissect the population by filtering out certain subjects. Last, the Individual Explorer establishes a cohesive patient narrative, allowing the user to interact with patient metrics (params) by visit or plotting important patient events on a timeline. All modules allow for concise filtering & downloading bulk outputs into html or pdf formats to save for later.

Authors:Aaron Clark [aut, cre], Jeff Thompson [aut], Teresa Wilson [aut], Nate Mockler [ccp, led], Maya Gans [aut], Robert Krajcik [ctb], Marly Gotti [ctb], Biogen Inc [cph]

tidyCDISC_0.2.1.tar.gz
tidyCDISC_0.2.1.zip(r-4.5)tidyCDISC_0.2.1.zip(r-4.4)tidyCDISC_0.2.1.zip(r-4.3)
tidyCDISC_0.2.1.tgz(r-4.4-any)tidyCDISC_0.2.1.tgz(r-4.3-any)
tidyCDISC_0.2.1.tar.gz(r-4.5-noble)tidyCDISC_0.2.1.tar.gz(r-4.4-noble)
tidyCDISC_0.2.1.tgz(r-4.4-emscripten)tidyCDISC_0.2.1.tgz(r-4.3-emscripten)
tidyCDISC.pdf |tidyCDISC.html
tidyCDISC/json (API)
NEWS

# Install 'tidyCDISC' in R:
install.packages('tidyCDISC', repos = c('https://biogen-inc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/biogen-inc/tidycdisc/issues

Datasets:

On CRAN:

pharmarinpharma

6.82 score 106 stars 18 scripts 221 downloads 14 exports 120 dependencies

Last updated 2 years agofrom:f41ed77e1f. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 12 2024
R-4.5-winOKOct 12 2024
R-4.5-linuxOKOct 12 2024
R-4.4-winOKOct 12 2024
R-4.4-macOKOct 12 2024
R-4.3-winOKOct 12 2024
R-4.3-macOKOct 12 2024

Exports:app_methodscol_for_list_exprcommon_rownamesdata_to_filterdata_to_use_strget_levelsprep_adaeprep_adslprep_bdspretty_IDsrun_appstd_footnotetg_gtvarN_fctr_reorder

Dependencies:askpassassertthatattemptbase64encbigDbitbit64bitopsbslibcachemciceroneclicliprcolorspacecommonmarkconfigcpp11crayoncrosstalkcurldata.tabledatawizarddigestdplyrDTevaluatefansifarverfastmapfontawesomeforcatsfsgenericsGGallyggcorrplotggplot2ggstatsgluegolemgtgtablehavenherehighrhmshtmltoolshtmlwidgetshttpuvhttrIDEAFilterinsightisobandjquerylibjsonlitejuicyjuiceknitrlabelinglaterlatticelazyevallifecyclemagrittrmarkdownMASSMatrixmemoisemgcvmimemunsellnlmeopensslpatchworkpillarpkgconfigplotlyplyrprettyunitsprogresspromisespurrrR6rappdirsRColorBrewerRcppreactablereactRreadrreshape2rlangrmarkdownrprojrootsassscalesshinyshinyjsshinyTimeshinyWidgetssjlabelledsourcetoolsstringistringrsurvivalsystibbletidyrtidyselecttimevistinytextippytzdbutf8V8vctrsviridisLitevroomwithrxfunxml2xtableyaml

Get Started with {tidyCDISC}

Rendered fromgetting_started.Rmdusingknitr::rmarkdownon Oct 12 2024.

Last update: 2022-08-31
Started: 2022-08-31